feat: DEM-based elevation recalculation via edit drawer button
Adds a "Recalculate from terrain map (DEM)" button to the activity edit
drawer. On click it queries an Open-Elevation-compatible API to replace
GPS altitude with SRTM terrain data, applies 5m hysteresis, and updates
the activity's elevation stats and timeseries chart in place.
- bincio/extract/dem.py: lookup_elevations() (batched HTTP POST) +
recalculate_elevation() (subsample → DEM → interpolate → hysteresis →
patch activity JSON, timeseries JSON, index.json)
- POST /api/activity/{id}/recalculate-elevation on both serve and edit
servers; serve endpoint is auth-gated and triggers merge + rebuild
- --dem-url flag (also DEM_URL env var) on bincio serve and bincio edit;
logged at startup; missing URL returns a clear 503 with setup instructions
- /api/me response gains dem_configured bool
- EditDrawer: button with loading state, shows new ↑/↓ values on success
This commit is contained in:
@@ -24,6 +24,8 @@ console = Console()
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help="Strava API client ID (enables Strava sync in the UI). Also reads STRAVA_CLIENT_ID env var.")
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@click.option("--strava-client-secret", default=None, envvar="STRAVA_CLIENT_SECRET",
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help="Strava API client secret. Also reads STRAVA_CLIENT_SECRET env var.")
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@click.option("--dem-url", default=None, envvar="DEM_URL",
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help="Base URL of an Open-Elevation-compatible API (enables 'Recalculate elevation' button).")
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def edit(
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data_dir: Optional[str],
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port: int,
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@@ -31,6 +33,7 @@ def edit(
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config_path: Optional[str],
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strava_client_id: Optional[str],
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strava_client_secret: Optional[str],
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dem_url: Optional[str],
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) -> None:
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"""Start a local web UI for editing activity sidecar files.
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@@ -69,11 +72,16 @@ def edit(
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srv.site_url = site_url
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srv.strava_client_id = strava_client_id or ""
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srv.strava_client_secret = strava_client_secret or ""
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srv.dem_url = dem_url or ""
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if strava_client_id:
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console.print(f"Strava sync: [green]enabled[/green] (client {strava_client_id})")
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else:
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console.print("Strava sync: [yellow]disabled[/yellow] (pass --strava-client-id to enable)")
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if dem_url:
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console.print(f"DEM: [green]enabled[/green] ({dem_url})")
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else:
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console.print("DEM: [yellow]disabled[/yellow] (pass --dem-url to enable elevation recalculation)")
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uvicorn.run(srv.app, host="127.0.0.1", port=port, log_level="warning")
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@@ -20,6 +20,7 @@ data_dir: Path | None = None
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site_url: str = "http://localhost:4321"
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strava_client_id: str = ""
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strava_client_secret: str = ""
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dem_url: str = "" # Open-Elevation-compatible API base URL; empty = feature disabled
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# In-memory CSRF state tokens for OAuth flows (token → True); cleared after use
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_oauth_states: set[str] = set()
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@@ -427,6 +428,32 @@ async def save_activity(activity_id: str, payload: dict[str, Any]) -> JSONRespon
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return JSONResponse({"ok": True, "sidecar": str(sidecar_path)})
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@app.post("/api/activity/{activity_id}/recalculate-elevation")
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async def recalculate_elevation_endpoint(activity_id: str) -> JSONResponse:
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"""Replace GPS altitude with DEM terrain elevation and recompute gain/loss.
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Requires --dem-url to be set when starting bincio edit.
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"""
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if not dem_url:
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raise HTTPException(
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503,
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"DEM URL not configured. "
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"Pass --dem-url <api-url> to bincio edit (e.g. https://api.open-elevation.com).",
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)
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dd = _get_data_dir()
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_check_id(activity_id)
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try:
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from bincio.extract.dem import recalculate_elevation
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from bincio.render.merge import merge_one
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result = recalculate_elevation(dd, activity_id, dem_url)
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merge_one(dd, activity_id)
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return JSONResponse(result)
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except FileNotFoundError as e:
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raise HTTPException(404, str(e))
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except ValueError as e:
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raise HTTPException(422, str(e))
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@app.post("/api/activity/{activity_id}/images")
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async def upload_image(activity_id: str, file: UploadFile = File(...)) -> JSONResponse:
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dd = _get_data_dir()
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@@ -0,0 +1,221 @@
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"""DEM (Digital Elevation Model) lookup and elevation recalculation.
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Queries any Open-Elevation-compatible HTTP API to replace noisy GPS altitude
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with terrain altitude, then re-applies hysteresis-based accumulation.
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Compatible APIs:
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- https://api.open-elevation.com (free, SRTM, accepts large batches)
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- https://api.opentopodata.org/v1/srtm30m (more reliable, max 100 pts/req)
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Pass the base URL (without path) to bincio serve/edit via --dem-url.
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"""
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from __future__ import annotations
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import json
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import urllib.error
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import urllib.request
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from pathlib import Path
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from typing import Optional
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# Sample one GPS point per N seconds when building the DEM query.
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# SRTM30 resolution is ~30 m; at 30 km/h cycling that's ~3 s per tile —
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# sampling every 10 s is more than enough.
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_DEFAULT_SAMPLE_INTERVAL_S = 10
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# Maximum locations per API request. Open-Elevation supports ~512 per POST.
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_DEFAULT_BATCH_SIZE = 512
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# Hysteresis threshold after DEM correction. DEM data is already smooth
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# (30 m horizontal resolution) so 5 m is a generous dead-band.
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_DEM_HYSTERESIS_M = 5.0
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def lookup_elevations(
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latlons: list[tuple[float, float]],
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api_url: str,
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batch_size: int = _DEFAULT_BATCH_SIZE,
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timeout_s: int = 30,
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) -> list[Optional[float]]:
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"""Query a DEM API for terrain elevation at the given (lat, lon) pairs.
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Uses the Open-Elevation API format::
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POST {api_url}/api/v1/lookup
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{"locations": [{"latitude": lat, "longitude": lon}, ...]}
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Returns a list the same length as *latlons*. Elements are ``None``
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wherever the API returned no data (network error, ocean, etc.).
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"""
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if not latlons:
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return []
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results: list[Optional[float]] = [None] * len(latlons)
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url = f"{api_url.rstrip('/')}/api/v1/lookup"
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for start in range(0, len(latlons), batch_size):
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batch = latlons[start : start + batch_size]
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payload = json.dumps(
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{"locations": [{"latitude": lat, "longitude": lon} for lat, lon in batch]}
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).encode("utf-8")
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req = urllib.request.Request(
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url,
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data=payload,
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headers={"Content-Type": "application/json", "Accept": "application/json"},
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method="POST",
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)
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try:
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with urllib.request.urlopen(req, timeout=timeout_s) as resp:
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data = json.loads(resp.read().decode("utf-8"))
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for i, item in enumerate(data.get("results", [])):
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elev = item.get("elevation")
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if elev is not None:
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results[start + i] = float(elev)
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except (urllib.error.URLError, json.JSONDecodeError, KeyError, ValueError):
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pass # leave this batch as None; caller checks overall coverage
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return results
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def recalculate_elevation(
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user_dir: Path,
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activity_id: str,
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dem_url: str,
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sample_interval_s: int = _DEFAULT_SAMPLE_INTERVAL_S,
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) -> dict:
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"""Replace GPS elevation with DEM terrain elevation and recompute gain/loss.
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Algorithm
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---------
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1. Read the activity's 1 Hz timeseries for lat / lon / t arrays.
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2. Subsample GPS points every *sample_interval_s* seconds.
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3. Query the DEM API for those points (batched).
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4. Linearly interpolate DEM elevation back to every GPS-valid second.
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5. Apply :data:`_DEM_HYSTERESIS_M` hysteresis to compute gain / loss.
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6. Write the updated ``elevation_m`` array to the timeseries JSON.
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7. Patch ``elevation_gain_m`` / ``elevation_loss_m`` in the detail JSON.
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8. Patch ``elevation_gain_m`` in ``index.json`` (summary entry for the feed).
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Returns
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-------
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dict with keys ``elevation_gain_m``, ``elevation_loss_m``,
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``points_queried`` (DEM responses received).
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Raises
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------
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FileNotFoundError
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Activity detail or timeseries file not found.
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ValueError
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Activity has no GPS coordinates, or the DEM API returned too few results.
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"""
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acts_dir = user_dir / "activities"
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json_path = acts_dir / f"{activity_id}.json"
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ts_path = acts_dir / f"{activity_id}.timeseries.json"
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if not json_path.exists():
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raise FileNotFoundError(f"Activity not found: {activity_id}")
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if not ts_path.exists():
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raise ValueError("Activity has no timeseries data")
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ts = json.loads(ts_path.read_text(encoding="utf-8"))
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lat_arr: list[Optional[float]] = ts.get("lat") or []
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lon_arr: list[Optional[float]] = ts.get("lon") or []
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t_arr: list[int] = ts.get("t") or []
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if not lat_arr or not lon_arr:
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raise ValueError(
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"Activity has no GPS coordinates "
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"(privacy=no_gps or data recorded without GPS)"
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)
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n = len(t_arr)
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# ── 1. Subsample GPS-valid indices ────────────────────────────────────────
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gps_idx = [
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i for i in range(n)
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if lat_arr[i] is not None and lon_arr[i] is not None
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]
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if len(gps_idx) < 2:
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raise ValueError("Too few GPS points for DEM lookup")
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sampled_idx = gps_idx[::sample_interval_s]
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if gps_idx[-1] not in sampled_idx:
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sampled_idx.append(gps_idx[-1]) # always include the last point
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# ── 2. Query DEM ──────────────────────────────────────────────────────────
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latlons = [(float(lat_arr[i]), float(lon_arr[i])) for i in sampled_idx] # type: ignore[arg-type]
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dem_elev = lookup_elevations(latlons, dem_url)
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# Build (t, elevation) pairs for valid DEM responses only
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valid_pairs: list[tuple[int, float]] = [
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(t_arr[sampled_idx[k]], dem_elev[k])
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for k in range(len(sampled_idx))
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if dem_elev[k] is not None
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]
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n_queried = len(valid_pairs)
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if n_queried < 2:
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raise ValueError(
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f"DEM API returned too few results "
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f"({n_queried} of {len(sampled_idx)} points). "
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f"Check the DEM URL: {dem_url}"
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)
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# ── 3. Linear interpolation → full 1 Hz series ───────────────────────────
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new_ele: list[Optional[float]] = [None] * n
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j = 0
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for i in gps_idx:
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t = t_arr[i]
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# Advance j so valid_pairs[j] is the left anchor for t
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while j + 1 < len(valid_pairs) - 1 and valid_pairs[j + 1][0] <= t:
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j += 1
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t0, e0 = valid_pairs[j]
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if j + 1 < len(valid_pairs):
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t1, e1 = valid_pairs[j + 1]
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frac = max(0.0, min(1.0, (t - t0) / (t1 - t0))) if t1 > t0 else 0.0
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new_ele[i] = round(e0 + frac * (e1 - e0), 1)
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else:
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new_ele[i] = round(e0, 1)
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# ── 4. Hysteresis accumulation ────────────────────────────────────────────
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valid_eles = [e for e in new_ele if e is not None]
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gain = loss = 0.0
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committed = valid_eles[0]
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for e in valid_eles[1:]:
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diff = e - committed
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if abs(diff) >= _DEM_HYSTERESIS_M:
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if diff > 0:
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gain += diff
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else:
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loss += diff
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committed = e
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gain_r = round(gain, 1)
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loss_r = round(abs(loss), 1)
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# ── 5. Write timeseries ───────────────────────────────────────────────────
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ts["elevation_m"] = new_ele
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ts_path.write_text(json.dumps(ts, indent=2, ensure_ascii=False), encoding="utf-8")
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# ── 6. Patch activity detail JSON ─────────────────────────────────────────
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detail = json.loads(json_path.read_text(encoding="utf-8"))
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detail["elevation_gain_m"] = gain_r
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detail["elevation_loss_m"] = loss_r
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json_path.write_text(json.dumps(detail, indent=2, ensure_ascii=False), encoding="utf-8")
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# ── 7. Patch index.json summary (so merge_all picks up the new value) ─────
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index_path = user_dir / "index.json"
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if index_path.exists():
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index = json.loads(index_path.read_text(encoding="utf-8"))
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for s in index.get("activities", []):
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if s.get("id") == activity_id:
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s["elevation_gain_m"] = gain_r
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break
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index_path.write_text(
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json.dumps(index, indent=2, ensure_ascii=False), encoding="utf-8"
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)
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return {
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"elevation_gain_m": gain_r,
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"elevation_loss_m": loss_r,
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"points_queried": n_queried,
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}
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+6
-1
@@ -21,10 +21,11 @@ console = Console()
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@click.option("--max-users", default=None, type=int, help="Override max users for this instance (0 = unlimited; updates the DB setting)")
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@click.option("--public-url", default=None, envvar="PUBLIC_URL", help="Public base URL (e.g. https://yourdomain.com). Required for Strava OAuth to work behind a reverse proxy.")
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@click.option("--webroot", default=None, type=click.Path(), help="Nginx webroot (e.g. /var/www/bincio). When set, uploads trigger a full Astro build + rsync so new activity pages are immediately accessible without a git push.")
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@click.option("--dem-url", default=None, envvar="DEM_URL", help="Base URL of an Open-Elevation-compatible API (enables 'Recalculate elevation' button in the edit drawer).")
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def serve(data_dir: str, site_dir: Optional[str], host: str, port: int,
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strava_client_id: Optional[str], strava_client_secret: Optional[str],
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max_users: Optional[int], public_url: Optional[str],
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webroot: Optional[str]) -> None:
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webroot: Optional[str], dem_url: Optional[str]) -> None:
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"""Start the bincio multi-user application server.
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Handles auth, user management, and write operations.
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@@ -58,6 +59,8 @@ def serve(data_dir: str, site_dir: Optional[str], host: str, port: int,
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srv.public_url = public_url
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if webroot and site_dir:
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srv.webroot = Path(webroot).expanduser().resolve()
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if dem_url:
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srv.dem_url = dem_url
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db = open_db(dd)
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current_limit = get_setting(db, "max_users")
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@@ -74,6 +77,8 @@ def serve(data_dir: str, site_dir: Optional[str], host: str, port: int,
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console.print(f" Users: [yellow]max {current_limit}[/yellow]")
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else:
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console.print(f" Users: [dim]unlimited[/dim]")
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if dem_url:
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console.print(f" DEM: [cyan]{dem_url}[/cyan]")
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console.print()
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log_config = uvicorn.config.LOGGING_CONFIG.copy()
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@@ -158,6 +158,7 @@ webroot: Path | None = None # nginx webroot — when set, trigger full rebuil
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strava_client_id: str = ""
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strava_client_secret: str = ""
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public_url: str = "" # e.g. "https://yourdomain.com" — used for OAuth redirect URIs
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dem_url: str = "" # Open-Elevation-compatible API base URL; empty = feature disabled
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_db = None # sqlite3.Connection, opened lazily
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@@ -404,6 +405,7 @@ async def me(bincio_session: Optional[str] = Cookie(default=None)) -> JSONRespon
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"display_name": user.display_name,
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"is_admin": user.is_admin,
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"store_originals_default": store_orig != "false",
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"dem_configured": bool(dem_url),
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})
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@@ -1265,6 +1267,39 @@ async def post_activity(
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return JSONResponse({"ok": True})
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@app.post("/api/activity/{activity_id}/recalculate-elevation")
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async def recalculate_elevation_endpoint(
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activity_id: str,
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bincio_session: Optional[str] = Cookie(default=None),
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) -> JSONResponse:
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"""Replace GPS altitude with DEM terrain elevation and recompute gain/loss.
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Requires --dem-url to be set when starting bincio serve.
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"""
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user = _require_user(bincio_session)
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_check_id(activity_id)
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if not dem_url:
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raise HTTPException(
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503,
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"DEM URL not configured. "
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"Pass --dem-url <api-url> to bincio serve (e.g. https://api.open-elevation.com).",
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)
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dd = _get_data_dir() / user.handle
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if not (dd / "activities" / f"{activity_id}.json").exists():
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raise HTTPException(404, "Activity not found")
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try:
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from bincio.extract.dem import recalculate_elevation
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from bincio.render.merge import merge_one
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result = recalculate_elevation(dd, activity_id, dem_url)
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merge_one(dd, activity_id)
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_trigger_rebuild(user.handle)
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return JSONResponse(result)
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except FileNotFoundError as e:
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raise HTTPException(404, str(e))
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except ValueError as e:
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raise HTTPException(422, str(e))
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@app.delete("/api/activity/{activity_id}", response_model=GenericResponse)
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async def delete_activity(
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activity_id: str,
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Reference in New Issue
Block a user